Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs6659239 chr1:89500185 G/A 0.000203 283 18.9 34.67 25.63 KM Plot
KIRP rs6659504 chr1:26539351 G/A 7.24E-5 282 25.82 29.67 13.17 KM Plot
KIRP rs6662905 chr1:58989335 G/A 1.61E-5 287 25.6 27.43 13.17 KM Plot
KIRP rs6663128 chr1:58989558 G/A 2.29E-5 289 25.6 27.43 13.17 KM Plot
KIRP rs6664397 chr1:205051871 C/T 6.54E-5 288 23.02 28.03 24.3 KM Plot
KIRP rs6668108 chr1:165691320 A/G 1.2E-6 288 17.13 44 23.63 KM Plot
KIRP rs66785117 chr6:27523298 T/G 1.21E-8 289 25.58 28.68 9.77 KM Plot
KIRP rs667874 chr19:23645194 G/T 2.92E-5 289 28.03 24.03 20.85 KM Plot
KIRP rs6682499 chr1:59000468 C/T 2.29E-5 289 25.6 27.43 13.17 KM Plot
KIRP rs6682661 chr1:59000436 G/A 2.29E-5 289 25.6 27.43 13.17 KM Plot
KIRP rs6682720 chr1:59000669 C/T 2.29E-5 289 25.6 27.43 13.17 KM Plot
KIRP rs6683157 chr1:26545865 G/A 7.58E-5 283 25.67 28.87 13.17 KM Plot
KIRP rs6684553 chr1:59002966 C/T 2.29E-5 289 13.17 26.82 25.65 KM Plot
KIRP rs66886492 chr6:28089731 C/T 1.42E-8 288 25.58 29.2 9.77 KM Plot
KIRP rs6690962 chr1:231119459 G/A 4.77E-5 280 24.67 28.83 10.97 KM Plot